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Crystal structure of hypothetical protein PH0156 from pyrococcus horikoshii OT3

Analyse Crystal structure of hypothetical protein PH0156 from pyrococcus horikoshii OT3 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2P62
Type: protein
Length: 482 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein PH0156
UniProt: O57895
Pockets: 5 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 44% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Hypothetical protein PH0156	protein	241	44% helix, 19% strand	O57895

Pockets

5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	97	0.52	0.83	25	empty
2	133	0.44	0.76	26	empty
3	93	0.38	0.75	18	empty
4	68	0.37	0.79	21	empty
5	57	0.33	0.77	16	empty

Interfaces

1 interface between chains.

A–B · 1140 Å² buried · 19 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

2P62 · Crystal structure of hypothetical protein PH0156 from Pyrococcus horikoshii OT3 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O57895
Elsewhere: RCSB PDB 2P62 · PDBe 2P62 · UniProt O57895

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