MolNFT v1 · #47023 · protein + RNA

High-resolution cryo-EM structure of tobacco mosaic virus

2OM3 · Tobacco mosaic virus RNA: “High-resolution cryo-EM structure of tobacco mosaic virus”. Electron microscopy, 1 pocket (best druggability 0.32). MolNFT v1 #47023 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2OM3
Type: protein + RNA
Length: 157 residues
Chains: 2
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tobacco mosaic virus RNA; Coat protein
UniProt: Q77LT8
Pockets: 1 · best druggability 0.32

Structure

electron microscopy · 2 distinct chains · 45% helix, 6% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
R	Tobacco mosaic virus RNA	rna	3	—	—
A	Coat protein	protein	154	45% helix, 6% strand	Q77LT8

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	51	0.32	0.78	13	empty

Interfaces

1 interface between chains.

R–A · 395 Å² buried · 12 hydrogen bonds · protein-nucleic

Compared structures

2OM3 · High-resolution cryo-EM structure of Tobacco Mosaic Virus · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q77LT8
Elsewhere: RCSB PDB 2OM3 · PDBe 2OM3 · UniProt Q77LT8

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.