MolNFT v1 · #46943 · protein
Structure of ubiquitin solved by sad using the lanthanide-binding tag
2OJR: “Structure of ubiquitin solved by sad using the lanthanide-binding tag”. X-ray diffraction, 1 ligand (TB). MolNFT v1 #46943 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2OJR
- Type
- protein
- Length
- 110 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ubiquitin
- UniProt
- P62988
- Ligands
- TB
Structure
x-ray diffraction · 1 distinct chain · 16% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin | protein | 110 | 16% helix, 26% strand | P62988 |
Ligands and binding sites
- TB · Terbium(iii) ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 2OJR · Structure of ubiquitin solved by SAD using the Lanthanide-Binding Tag · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P62988
- Elsewhere: RCSB PDB 2OJR · PDBe 2OJR · UniProt P62988
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