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MolNFT v1 · #46599 · protein

Crystal structure of E. COLI hu heterodimer

2O97 · DNA-binding protein hu-alpha: “Crystal structure of E. COLI hu heterodimer”. X-ray diffraction, 2 ligands (NI, CL). MolNFT v1 #46599 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
2O97
Type
protein
Length
141 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
DNA-binding protein hu-alpha; DNA-binding protein hu-beta
UniProt
P0ACF0, P0ACF4
Ligands
NI, CL

Structure

x-ray diffraction · 2 distinct chains · 53% helix, 23% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ADNA-binding protein hu-alphaprotein7056% helix, 23% strandP0ACF0
BDNA-binding protein hu-betaprotein7151% helix, 23% strandP0ACF4

Ligands and binding sites

  • NI · Nickel (II) ion · metal · chains A, B
  • CL · Chloride ion · ion · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 1810 Ų buried · 16 hydrogen bonds · protein-protein

Compared structures

  • 2O97 · Crystal Structure of E. coli HU heterodimer · the same entry in another collection · chain A against A, TM-score 1.00
  • P0ACF0 · AlphaFold monomer V2.0 prediction for DNA-binding protein hu-alpha (P0ACF0) · a predicted model of the same protein · chain A against A, TM-score 0.98
  • P0ACF4 · AlphaFold monomer V2.0 prediction for DNA-binding protein hu-beta (P0ACF4) · a predicted model of the same protein · chain B against A, TM-score 0.96

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