MolNFT v1 · #46305 · protein

T4 GP17 ATPase domain mutant

2O0K · DNA packaging protein GP17: “T4 GP17 ATPase domain mutant”. X-ray diffraction, 5 pockets (best druggability 0.62). MolNFT v1 #46305 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2O0K
Type: protein
Length: 357 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA packaging protein GP17
UniProt: P17312
Pockets: 5 · best druggability 0.62

Structure

x-ray diffraction · 1 distinct chain · 37% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA packaging protein GP17	protein	357	37% helix, 18% strand	P17312

Pockets

5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	111	0.62	0.87	23	empty
2	226	0.53	0.77	29	empty
3	201	0.50	0.76	24	empty
4	105	0.41	0.77	18	empty
5	51	0.33	0.77	16	empty

Compared structures

2O0K · T4 gp17 ATPase domain mutant · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P17312
Elsewhere: RCSB PDB 2O0K · PDBe 2O0K · UniProt P17312

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