Research workbench
T4 GP17 ATPase domain mutant
Analyse T4 GP17 ATPase domain mutant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2O0K
- Type
- protein
- Length
- 357 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA packaging protein GP17
- UniProt
- P17312
- Pockets
- 5 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA packaging protein GP17 | protein | 357 | 37% helix, 18% strand | P17312 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 111 | 0.62 | 0.87 | 23 | empty |
| 2 | 226 | 0.53 | 0.77 | 29 | empty |
| 3 | 201 | 0.50 | 0.76 | 24 | empty |
| 4 | 105 | 0.41 | 0.77 | 18 | empty |
| 5 | 51 | 0.33 | 0.77 | 16 | empty |
Compared structures
- 2O0K · T4 gp17 ATPase domain mutant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P17312
- Elsewhere: RCSB PDB 2O0K · PDBe 2O0K · UniProt P17312
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