MolNFT v1 · #45445 · protein

Solution structure of LEDGF/P75 ibd in complex with pogz peptide (1389-1404)

2N3A · Pogo transposable element with znf domain: “Solution structure of LEDGF/P75 ibd in complex with pogz peptide (1389-1404)”. Solution nmr. MolNFT v1 #45445 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2N3A
Type: protein
Length: 95 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Pogo transposable element with znf domain; PC4 and SFRS1-interacting protein
UniProt: Q7Z3K3, O75475

Structure

solution nmr · 2 distinct chains · 61% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pogo transposable element with znf domain	protein	16	0% helix, 0% strand	Q7Z3K3
B	PC4 and SFRS1-interacting protein	protein	79	73% helix, 0% strand	O75475

Interfaces

1 interface between chains.

A–B · 426 Å² buried · 1 hydrogen bond · protein-protein

Compared structures

2N3A · Solution structure of LEDGF/p75 IBD in complex with POGZ peptide (1389-1404) · the same entry in another collection · chain A against A, TM-score 1.00
O75475 · AlphaFold monomer V2.0 prediction for PC4 and SFRS1-interacting protein (O75475) · a predicted model of the same protein · chain B against A, TM-score 0.93
Q7Z3K3 · AlphaFold monomer V2.0 prediction for pogo transposable element with znf domain (Q7Z3K3) · a predicted model of the same protein · chain A against A, TM-score 0.25

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7Z3K3
Every structure of UniProt O75475
Elsewhere: RCSB PDB 2N3A · PDBe 2N3A · UniProt Q7Z3K3 · UniProt O75475

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