MolNFT v1 · #44750 · protein

Structure and NMR assignments of lantibiotic nai-107 in dpc micelles

2MH5 · Lantibiotic 107891: “Structure and NMR assignments of lantibiotic nai-107 in dpc micelles”. Solution nmr, 2 ligands (DPV, TEE). MolNFT v1 #44750 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2MH5
Type: protein
Length: 23 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lantibiotic 107891
UniProt: P85065
Ligands: DPV, TEE

Structure

solution nmr · 1 distinct chain · 0% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lantibiotic 107891	protein	23	0% helix, 0% strand	P85065

Ligands and binding sites

DPV · dodecyl 2-(trimethylammonio)ethyl phosphate · ligand · 65 copies · chains A
TEE · 2-amino-ethenethiol · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 5 modified, 4 d-amino, 2 covalent (D-amino acid, nonstandard, covalent ligand, hydroxylation).

Compared structures

2MH5 · Structure and NMR assignments of lantibiotic NAI-107 in DPC micelles · the same entry in another collection · chain A against A, TM-score 1.00
P85065 · AlphaFold monomer V2.0 prediction for lantibiotic 107891 (P85065) · a predicted model of the same protein · chain A against A, TM-score 0.16

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P85065
Elsewhere: RCSB PDB 2MH5 · PDBe 2MH5 · UniProt P85065

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