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Ligand · DPV

DPV · dodecyl 2-(trimethylammonio)ethyl phosphate

DPV, dodecyl 2-(trimethylammonio)ethyl phosphate (C17 H38 N O4 P, 351.5 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
DPV
Formula
C17 H38 N O4 P
Class
ligand
Structures
7
PDB entries
4

Binding sites

DPV in 7 structures; the first of them:

  • 5NNT · The dimeric structure of LL-37 crystallized in DPC · DPV A101 · binds ASP4, PHE5, PHE6, ARG23, ILE24, PHE27, LEU28
  • 6SNC · crystal structure of LN01 Fab in complex with an HIV-1 gp41 peptide · DPV H301 · binds ASP32, ASN33, TYR52, SER97, GLY99, PHE100, TRP100A
  • 7L92 · C1B domain of Protein kinase C in complex with diacylglycerol and dodecyl… · DPV D304 · binds GLU262, SER240, PRO241, THR242
  • 5NNT · The dimeric structure of ll-37 crystallized in dpc · DPV A101 · binds ASP4, PHE5, PHE6, ARG23, PHE27, LEU28
  • 6SNC · Crystal structure of LN01 Fab in complex with an HIV-1 GP41 peptide · DPV H301 · binds ASP32, ASN33, TYR52, SER97, GLY99, PHE100, TRP100A
  • 6SND · Crystal structure of LN01 Fab in complex with an HIV-1 GP41 peptide · DPV A302 · binds THR30, LYS31, TYR32, TYR100G, TRP680, TYR681, PHE685
  • 7L92 · C1B domain of protein kinase C in complex with diacylglycerol and dodecyl… · DPV D304 · binds SER240, PRO241

Residues it binds most

PHE 15, LEU 14, SER 14, TRP 13, GLY 10, ASP 8, PRO 4, TYR 3, ARG 4, GLU 4 (residue and the binding sites it lines).

Found with

  • PC · Phosphocholine
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • DGA · Diacyl glycerol
  • ZN · Zinc ion
  • PO4 · Phosphate ion
  • EOH · Ethanol

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