MolNFT v1 · #4413 · DNA
The crystal structure of D(GGATGGGAG). an essential part of the binding site for transcription factor iiia
1DN6 · DNA (5'-D(*GP*GP*AP*TP*GP*GP*GP*AP*G)-3'): “The crystal structure of D(GGATGGGAG). an essential part of the binding site for transcription factor iiia”. X-ray diffraction. MolNFT v1 #4413 on GenesisL1: 3D structure, binding sites…
- PDB
- 1DN6
- Type
- DNA
- Length
- 18 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*GP*GP*AP*TP*GP*GP*GP*AP*G)-3'); DNA (5'-D(*CP*TP*CP*CP*CP*AP*TP*CP*C)-3')
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'-D(*GP*GP*AP*TP*GP*GP*GP*AP*G)-3') | dna | 9 | — | — |
| B | DNA (5'-D(*CP*TP*CP*CP*CP*AP*TP*CP*C)-3') | dna | 9 | — | — |
Interfaces
1 interface between chains.
- A–B · 432 Ų buried · 61 hydrogen bonds · nucleic-nucleic
Compared structures
- 1DN6 · The crystal structure of D(GGATGGGAG). an essential part of the binding site for… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1DN6 · PDBe 1DN6
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