MolNFT v1 · #44088 · protein
NMR structure of rela-TAD/CBP-TAZ1 complex
2LWW · Creb-binding protein: “NMR structure of rela-TAD/CBP-TAZ1 complex”. Solution nmr, 1 ligand (ZN), 3 pockets (best druggability 0.47). MolNFT v1 #44088 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2LWW
- Type
- protein
- Length
- 170 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Creb-binding protein; Nuclear transcription factor rela
- EC
- 2.3.1.48
- UniProt
- P45481, Q548Y4
- Ligands
- ZN
- Pockets
- 3 · best druggability 0.47
Structure
solution nmr · 2 distinct chains · 45% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Creb-binding protein (EC 2.3.1.48) | protein | 100 | 57% helix, 0% strand | P45481 |
| B | Nuclear transcription factor rela | protein | 70 | 29% helix, 0% strand | Q548Y4 |
Ligands and binding sites
- ZN · Zinc ion · metal · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 130 | 0.47 | 0.78 | 15 | empty |
| 2 | 153 | 0.44 | 0.75 | 26 | empty |
| 3 | 72 | 0.38 | 0.77 | 12 | empty |
Interfaces
1 interface between chains.
- A–B · 2544 Ų buried · 27 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P45481
- Every structure of UniProt Q548Y4
- Elsewhere: RCSB PDB 2LWW · PDBe 2LWW · UniProt P45481 · UniProt Q548Y4
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