MolNFT v1 · #44042 · protein

Solution structure of ca-bound phl P 7

2LVK · Polcalcin phl P 7: “Solution structure of ca-bound phl P 7”. Solution nmr, 1 ligand (CA), 1 pocket (best druggability 0.57). MolNFT v1 #44042 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2LVK
Type: protein
Length: 77 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Polcalcin phl P 7
UniProt: O82040
Ligands: CA
Pockets: 1 · best druggability 0.57

Structure

solution nmr · 1 distinct chain · 65% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Polcalcin phl P 7	protein	77	65% helix, 3% strand	O82040

Ligands and binding sites

CA · Calcium ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	110	0.57	0.84	21	empty

Compared structures

2LVK · Solution structure of Ca-bound Phl p 7 · the same entry in another collection · chain A against A, TM-score 1.00
O82040 · AlphaFold monomer V2.0 prediction for polcalcin phl P 7 (O82040) · a predicted model of the same protein · chain A against A, TM-score 0.89

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O82040
Elsewhere: RCSB PDB 2LVK · PDBe 2LVK · UniProt O82040

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