MolNFT v1 · #43290 · RNA
Chemical probe bound to HIV tar RNA
2L8H: “Chemical probe bound to HIV tar RNA”. Solution nmr, 2 ligands (ARG, L8H), 1 pocket (best druggability 0.53). MolNFT v1 #43290 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2L8H
- Type
- RNA
- Length
- 29 nucleotides
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- HIV tar RNA
- Ligands
- ARG, L8H
- Pockets
- 1 · best druggability 0.53
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | HIV tar RNA | rna | 29 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 167 | 0.53 | 0.80 | 22 | ARG, L8H |
Compared structures
- 2L8H · Chemical probe bound to HIV TAR RNA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2L8H · PDBe 2L8H
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.