MolNFT v1 · #43056 · protein
Zinc to cadmium replacement in the a. thaliana superman CYS2HIS2 zinc finger induces structural rearrangements of typical DNA base determinant positions
2L1O · Transcriptional regulator superman: “Zinc to cadmium replacement in the a. thaliana superman CYS2HIS2 zinc finger induces structural…”. Solution nmr, 3 ligands (ACE, CD, NH2). MolNFT v1 #43056 on GenesisL1: 3D structure, binding…
- PDB
- 2L1O
- Type
- protein
- Length
- 37 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcriptional regulator superman
- UniProt
- Q38895
- Ligands
- ACE, CD, NH2
Structure
solution nmr · 1 distinct chain · 22% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional regulator superman | protein | 37 | 22% helix, 11% strand | Q38895 |
Ligands and binding sites
- ACE · Acetyl group · ligand · chains A
- CD · Cadmium ion · metal · chains A
- NH2 · Amino group · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 covalent (covalent ligand).
Compared structures
- 2L1O · Zinc to cadmium replacement in the A. thaliana SUPERMAN Cys2His2 zinc finger induces… · the same entry in another collection · chain A against A, TM-score 1.00
- Q38895 · AlphaFold monomer V2.0 prediction for transcriptional regulator superman (Q38895) · a predicted model of the same protein · chain A against A, TM-score 0.53
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q38895
- Elsewhere: RCSB PDB 2L1O · PDBe 2L1O · UniProt Q38895
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