MolNFT v1 · #42302 · protein
Extended structure of citidine deaminase domain of APOBEC3G
2KEM · DNA dc->du-editing enzyme apobec-3G: “Extended structure of citidine deaminase domain of APOBEC3G”. Solution nmr, 1 ligand (ZN). MolNFT v1 #42302 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2KEM
- Type
- protein
- Length
- 194 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA dc->du-editing enzyme apobec-3G
- EC
- 3.5.4.-
- UniProt
- Q9HC16
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 35% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA dc->du-editing enzyme apobec-3G (EC 3.5.4.-) | protein | 194 | 35% helix, 10% strand | Q9HC16 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 2KEM · Extended structure of citidine deaminase domain of APOBEC3G · the same entry in another collection · chain A against A, TM-score 1.00
- Q9HC16 · AlphaFold monomer V2.0 prediction for DNA dc->du-editing enzyme apobec-3G (Q9HC16) · a predicted model of the same protein · chain A against A, TM-score 0.76
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HC16
- Elsewhere: RCSB PDB 2KEM · PDBe 2KEM · UniProt Q9HC16
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