MolNFT v1 · #42097 · protein

Solution structure of a novel ubiquitin-binding domain from human plaa (pfuc, GLY76-PRO77 cis isomer)

2K89 · Phospholipase a-2-activating protein: “Solution structure of a novel ubiquitin-binding domain from human plaa (pfuc, GLY76-PRO77 cis isomer)”. Solution nmr, 1 pocket (best druggability 0.26). MolNFT v1 #42097 on GenesisL1: 3D…

PDB: 2K89
Type: protein
Length: 80 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phospholipase a-2-activating protein
UniProt: Q9Y263
Pockets: 1 · best druggability 0.26

Structure

solution nmr · 1 distinct chain · 31% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phospholipase a-2-activating protein	protein	80	31% helix, 20% strand	Q9Y263

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	52	0.26	0.73	16	empty

Compared structures

2K89 · Solution structure of a novel Ubiquitin-binding domain from Human PLAA (PFUC, Gly76-Pro77… · the same entry in another collection · chain A against A, TM-score 1.00
Q9Y263 · AlphaFold monomer V2.0 prediction for phospholipase a-2-activating protein (Q9Y263) · a predicted model of the same protein · chain A against A, TM-score 0.69

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9Y263
Elsewhere: RCSB PDB 2K89 · PDBe 2K89 · UniProt Q9Y263

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