MolNFT v1 · #300863 · protein
AlphaFold monomer V2.0 prediction for phospholipase a-2-activating protein (Q9Y263)
Q9Y263: “AlphaFold monomer V2.0 prediction for phospholipase a-2-activating protein (Q9Y263)”. 7 pockets (best druggability 0.78). MolNFT v1 #300863 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9Y263
- Type
- protein
- Length
- 795 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB0755A2f7771BeB09D59dEE34388c0C970c91251
- Molecule
- Phospholipase a-2-activating protein
- UniProt
- Q9Y263
- Pockets
- 7 · best druggability 0.78
Structure
1 distinct chain · 30% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phospholipase a-2-activating protein | protein | 795 | 30% helix, 27% strand | Q9Y263 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 995 | 0.78 | 0.80 | 93 | empty |
| 2 | 589 | 0.75 | 0.82 | 58 | empty |
| 3 | 142 | 0.74 | 0.93 | 22 | empty |
| 4 | 154 | 0.53 | 0.80 | 20 | empty |
| 5 | 69 | 0.41 | 0.80 | 19 | empty |
Compared structures
- 3EBB · PLAP/P97 complex · an experimental structure of the same protein · chain A against A, TM-score 0.33
- 3EBB · PLAP/P97 complex · an experimental structure of the same protein · chain A against A, TM-score 0.33
- 2K89 · Solution structure of a novel Ubiquitin-binding domain from Human PLAA (PFUC, Gly76-Pro77… · an experimental structure of the same protein · chain A against A, TM-score 0.08
- 2K89 · Solution structure of a novel ubiquitin-binding domain from human plaa (pfuc, GLY76-PRO77… · an experimental structure of the same protein · chain A against A, TM-score 0.08
- 2K8B · Solution structure of PLAA family ubiquitin binding domain (PFUC) cis isomer in complex… · an experimental structure of the same protein · chain A against B, TM-score 0.08
- 2K8B · Solution structure of plaa family ubiquitin binding domain (pfuc) cis isomer in complex… · an experimental structure of the same protein · chain A against B, TM-score 0.08
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y263
- Elsewhere: UniProt Q9Y263 · AlphaFold DB Q9Y263
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