MolNFT v1 · #41988 · protein
The solution structure of gpv, the major tail protein from bacteriophage lambda
2K4Q · Major tail protein V: “The solution structure of gpv, the major tail protein from bacteriophage lambda”. Solution nmr, 4 pockets (best druggability 0.45). MolNFT v1 #41988 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 2K4Q
- Type
- protein
- Length
- 156 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Major tail protein V
- UniProt
- P03733
- Pockets
- 4 · best druggability 0.45
Structure
solution nmr · 1 distinct chain · 6% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Major tail protein V | protein | 156 | 6% helix, 29% strand | P03733 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 57 | 0.45 | 0.84 | 16 | empty |
| 2 | 106 | 0.37 | 0.74 | 19 | empty |
| 3 | 95 | 0.35 | 0.74 | 20 | empty |
| 4 | 69 | 0.28 | 0.73 | 16 | empty |
Compared structures
- 2K4Q · The Solution Structure of gpV, the Major Tail Protein from Bacteriophage Lambda · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03733
- Elsewhere: RCSB PDB 2K4Q · PDBe 2K4Q · UniProt P03733
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