Research workbench
The solution structure of gpv, the major tail protein from bacteriophage lambda
Analyse The solution structure of gpv, the major tail protein from bacteriophage lambda in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2K4Q
- Type
- protein
- Length
- 156 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Major tail protein V
- UniProt
- P03733
- Pockets
- 4 · best druggability 0.45
Structure
solution nmr · 1 distinct chain · 6% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Major tail protein V | protein | 156 | 6% helix, 29% strand | P03733 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 57 | 0.45 | 0.84 | 16 | empty |
| 2 | 106 | 0.37 | 0.74 | 19 | empty |
| 3 | 95 | 0.35 | 0.74 | 20 | empty |
| 4 | 69 | 0.28 | 0.73 | 16 | empty |
Compared structures
- 2K4Q · The Solution Structure of gpV, the Major Tail Protein from Bacteriophage Lambda · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03733
- Elsewhere: RCSB PDB 2K4Q · PDBe 2K4Q · UniProt P03733
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