MolNFT v1 · #41860 · protein
Solution structure of the C103S mutant of the N-terminal domain of dsbd from neisseria meningitidis
2K0R · THIOL:DISULFIDE interchange protein dsbd: “Solution structure of the C103S mutant of the N-terminal domain of dsbd from neisseria meningitidis”. Solution nmr, 1 pocket (best druggability 0.34). MolNFT v1 #41860 on GenesisL1: 3D…
- PDB
- 2K0R
- Type
- protein
- Length
- 128 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- THIOL:DISULFIDE interchange protein dsbd
- EC
- 1.8.1.8
- UniProt
- Q9JYM0
- Pockets
- 1 · best druggability 0.34
Structure
solution nmr · 1 distinct chain · 2% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | THIOL:DISULFIDE interchange protein dsbd (EC 1.8.1.8) | protein | 128 | 2% helix, 48% strand | Q9JYM0 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.34 | 0.77 | 13 | empty |
Compared structures
- 2K0R · Solution structure of the C103S mutant of the N-terminal Domain of DsbD from Neisseria… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9JYM0 · AlphaFold monomer V2.0 prediction for THIOL:DISULFIDE interchange protein dsbd (Q9JYM0) · a predicted model of the same protein · chain A against A, TM-score 0.83
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9JYM0
- Elsewhere: RCSB PDB 2K0R · PDBe 2K0R · UniProt Q9JYM0
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