MolNFT v1 · #41525 · protein

Solution structure of RPA3114, a sec-C motif containing protein from rhodopseudomonas palustris; northeast structural genomics consortium target RPT5 / ontario center for structural proteomics target RP3097

2JQ5: “Solution structure of RPA3114, a sec-C motif containing protein from rhodopseudomonas palustris; northeast…”. Solution nmr, 1 ligand (ZN), 2 pockets (best druggability 0.69). MolNFT v1 #41525 on GenesisL1: 3D structure, binding…

PDB: 2JQ5
Type: protein
Length: 128 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Sec-C motif
UniProt: Q6N568
Ligands: ZN
Pockets: 2 · best druggability 0.69

Structure

solution nmr · 1 distinct chain · 33% helix, 38% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Sec-C motif	protein	128	33% helix, 38% strand	Q6N568

Ligands and binding sites

ZN · Zinc ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	234	0.69	0.84	26	empty
2	69	0.37	0.78	13	empty

Compared structures

2JQ5 · Solution structure of RPA3114, a SEC-C motif containing protein from Rhodopseudomonas… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6N568
Elsewhere: RCSB PDB 2JQ5 · PDBe 2JQ5 · UniProt Q6N568

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