MolNFT v1 · #41407 · protein
NMR solution structure of phd finger fragment of yeast YNG1 protein in free state
2JMI · Protein YNG1: “NMR solution structure of phd finger fragment of yeast YNG1 protein in free state”. Solution nmr, 1 ligand (ZN). MolNFT v1 #41407 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2JMI
- Type
- protein
- Length
- 60 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein YNG1
- UniProt
- Q08465
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 15% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein YNG1 | protein | 60 | 15% helix, 7% strand | Q08465 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 9 disulfide (disulfide).
Compared structures
- 2JMI · NMR solution structure of PHD finger fragment of Yeast Yng1 protein in free state · the same entry in another collection · chain A against A, TM-score 1.00
- Q08465 · AlphaFold monomer V2.0 prediction for protein YNG1 (Q08465) · a predicted model of the same protein · chain A against A, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q08465
- Elsewhere: RCSB PDB 2JMI · PDBe 2JMI · UniProt Q08465
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.