Research workbench
NMR solution structure of phd finger fragment of yeast YNG1 protein in free state
Analyse NMR solution structure of phd finger fragment of yeast YNG1 protein in free… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2JMI
- Type
- protein
- Length
- 60 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein YNG1
- UniProt
- Q08465
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 15% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein YNG1 | protein | 60 | 15% helix, 7% strand | Q08465 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 9 disulfide (disulfide).
Compared structures
- 2JMI · NMR solution structure of PHD finger fragment of Yeast Yng1 protein in free state · the same entry in another collection · chain A against A, TM-score 1.00
- Q08465 · AlphaFold monomer V2.0 prediction for protein YNG1 (Q08465) · a predicted model of the same protein · chain A against A, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q08465
- Elsewhere: RCSB PDB 2JMI · PDBe 2JMI · UniProt Q08465
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