MolNFT v1 · #40557 · protein

Unbound glutaminyl cyclotransferase from carica papaya.

2IWA · Glutamine cyclotransferase: “Unbound glutaminyl cyclotransferase from carica papaya.”. X-ray diffraction, 2 ligands (NAG, CA), 1 pocket (best druggability 0.43). MolNFT v1 #40557 on GenesisL1: 3D structure, binding sites and pockets…

PDB: 2IWA
Type: protein
Length: 254 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Glutamine cyclotransferase
EC: 2.3.2.5
UniProt: O81226
Ligands: NAG, CA
Pockets: 1 · best druggability 0.43

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 52% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Glutamine cyclotransferase (EC 2.3.2.5)	protein	254	6% helix, 52% strand	O81226

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A
CA · Calcium ion · metal · chains A
GOL · Glycerol · additive · 5 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	141	0.43	0.75	24	empty

Modifications

Observed in the structure: 2 glycan, 1 disulfide (N-glycosylation, disulfide).

Compared structures

2IWA · Unbound glutaminyl cyclotransferase from Carica papaya. · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O81226
Elsewhere: RCSB PDB 2IWA · PDBe 2IWA · UniProt O81226

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