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MolNFT v1 · #40373 · protein

Crystal structure of a disulfide mutant glucose binding protein

2IPM · D-galactose-binding periplasmic protein: “Crystal structure of a disulfide mutant glucose binding protein”. X-ray diffraction, 2 ligands (BGC, CA). MolNFT v1 #40373 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
2IPM
Type
protein
Length
307 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
D-galactose-binding periplasmic protein
UniProt
P0AEE5
Ligands
BGC, CA

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 20% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AD-galactose-binding periplasmic proteinprotein30746% helix, 20% strandP0AEE5

Ligands and binding sites

  • BGC · beta-D-glucopyranose · sugar · chains A
  • CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 2IPM · Crystal structure of a disulfide mutant glucose binding protein · the same entry in another collection · chain A against A, TM-score 1.00
  • P0AEE5 · AlphaFold monomer V2.0 prediction for D-galactose-binding periplasmic protein (P0AEE5) · a predicted model of the same protein · chain A against A, TM-score 0.99

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