MolNFT v1 · #40348 · protein

Mouse P53 core domain soaked with 2-propanol

2IOM · Cellular tumor antigen P53: “Mouse P53 core domain soaked with 2-propanol”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #40348 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2IOM
Type: protein
Length: 187 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cellular tumor antigen P53
UniProt: P02340
Ligands: ZN

Structure

x-ray diffraction · 1 distinct chain · 8% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cellular tumor antigen P53	protein	187	8% helix, 34% strand	P02340

Ligands and binding sites

ZN · Zinc ion · metal · chains A
TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains A
IPA · Isopropyl alcohol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

2IOM · Mouse p53 core domain soaked with 2-propanol · the same entry in another collection · chain A against A, TM-score 1.00
P02340 · AlphaFold monomer V2.0 prediction for cellular tumor antigen P53 (P02340) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02340
Elsewhere: RCSB PDB 2IOM · PDBe 2IOM · UniProt P02340

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