GL1X · GenesisL1 explorer

MolNFT v1 · #40333 · protein

WEE1 kinase complexed with inhibitor PD330961

2IO6 · WEE1-like protein kinase: “WEE1 kinase complexed with inhibitor PD330961”. X-ray diffraction, 1 ligand (330), 2 pockets (best druggability 0.58). MolNFT v1 #40333 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
2IO6
Type
protein
Length
252 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
WEE1-like protein kinase
EC
2.7.10.2
UniProt
P30291
Ligands
330
Pockets
2 · best druggability 0.58

Structure

x-ray diffraction · 1 distinct chain · 39% helix, 19% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AWEE1-like protein kinase (EC 2.7.10.2)protein25239% helix, 19% strandP30291

Ligands and binding sites

  • 330 · 9-hydroxy-6-(3-hydroxypropyl)-4-(2-methoxyphenyl)pyrrolo[3,4-c]carbazole-1,3(2H,6H)-dione · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12230.580.7924330
2920.440.7920empty

Compared structures

  • 2IO6 · Wee1 kinase complexed with inhibitor PD330961 · the same entry in another collection · chain A against A, TM-score 1.00
  • P30291 · AlphaFold monomer V2.0 prediction for WEE1-like protein kinase (P30291) · a predicted model of the same protein · chain A against A, TM-score 0.98

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