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MolNFT v1 · #40189 · protein

Crystal structure of the adenosylmethionine decarboxylase (AQ_254) from aquifex aeolicus VF5

2III · S-adenosylmethionine decarboxylase proenzyme: “Crystal structure of the adenosylmethionine decarboxylase (AQ_254) from aquifex aeolicus VF5”. X-ray diffraction, 2 ligands (MG, CA). MolNFT v1 #40189 on GenesisL1: 3D structure…

PDB
2III
Type
protein
Length
120 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
S-adenosylmethionine decarboxylase proenzyme
EC
4.1.1.50
UniProt
O66615
Ligands
MG, CA

Structure

x-ray diffraction · 1 distinct chain · 29% helix, 46% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AS-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)protein12029% helix, 46% strandO66615

Ligands and binding sites

  • MG · Magnesium ion · metal · chains A
  • CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 modified (engineered).

Compared structures

  • 2III · Crystal structure of the adenosylmethionine decarboxylase (aq_254) from aquifex aeolicus… · the same entry in another collection · chain A against A, TM-score 1.00
  • O66615 · AlphaFold monomer V2.0 prediction for S-adenosylmethionine decarboxylase proenzyme… · a predicted model of the same protein · chain A against A, TM-score 0.97

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