MolNFT v1 · #39833 · protein
Structure of protein of unknown function ATU0120 from agrobacterium tumefaciens
2I6H · Hypothetical protein ATU0120: “Structure of protein of unknown function ATU0120 from agrobacterium tumefaciens”. X-ray diffraction, 2 ligands (CA, CL), 3 pockets (best druggability 0.65). MolNFT v1 #39833 on GenesisL1: 3D structure…
- PDB
- 2I6H
- Type
- protein
- Length
- 355 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein ATU0120
- UniProt
- Q8UJ18
- Ligands
- CA, CL
- Pockets
- 3 · best druggability 0.65
Structure
x-ray diffraction · 2 distinct chains · 75% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein ATU0120 | protein | 179 | 74% helix, 0% strand | Q8UJ18 |
| B | Hypothetical protein ATU0120 | protein | 176 | 75% helix, 0% strand | Q8UJ18 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 445 | 0.65 | 0.78 | 32 | CL |
| 2 | 352 | 0.58 | 0.76 | 34 | CL |
| 3 | 113 | 0.48 | 0.80 | 21 | CA, CL |
Interfaces
1 interface between chains.
- A–B · 599 Ų buried · 4 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 5 modified (engineered).
Compared structures
- 2I6H · Structure of Protein of Unknown Function ATU0120 from Agrobacterium tumefaciens · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8UJ18
- Elsewhere: RCSB PDB 2I6H · PDBe 2I6H · UniProt Q8UJ18
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