MolNFT v1 · #39670 · protein

The refined structure of C-terminal domain of an ef-hand calcium binding protein from entamoeba histolytica

2I18 · Calcium-binding protein: “The refined structure of C-terminal domain of an ef-hand calcium binding protein from entamoeba histolytica”. Solution nmr, 1 ligand (LA), 1 pocket (best druggability 0.48). MolNFT v1 #39670 on GenesisL1…

PDB: 2I18
Type: protein
Length: 64 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Calcium-binding protein
UniProt: P38505
Ligands: LA
Pockets: 1 · best druggability 0.48

Structure

solution nmr · 1 distinct chain · 59% helix, 9% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Calcium-binding protein	protein	64	59% helix, 9% strand	P38505

Ligands and binding sites

LA · Lanthanum (III) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	132	0.48	0.78	22	empty

Compared structures

2I18 · The refined structure of C-terminal domain of an EF-hand Calcium binding Protein from… · the same entry in another collection · chain A against A, TM-score 1.00
P38505 · AlphaFold monomer V2.0 prediction for calcium-binding protein (P38505) · a predicted model of the same protein · chain A against A, TM-score 0.67

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P38505
Elsewhere: RCSB PDB 2I18 · PDBe 2I18 · UniProt P38505

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