MolNFT v1 · #39238 · protein
Structure of a hyper-cleavable monomeric fragment of phage lambda repressor containing the cleavage site region
2HO0 · Repressor protein CI101-229DM-K192A: “Structure of a hyper-cleavable monomeric fragment of phage lambda repressor containing the cleavage site…”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.68). MolNFT v1 #39238…
- PDB
- 2HO0
- Type
- protein
- Length
- 128 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Repressor protein CI101-229DM-K192A
- UniProt
- Q7B004
- Ligands
- CA
- Pockets
- 1 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Repressor protein CI101-229DM-K192A | protein | 128 | 0% helix, 45% strand | Q7B004 |
Ligands and binding sites
- CA · Calcium ion · metal · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 67 | 0.68 | 0.95 | 20 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 2HO0 · Structure of a Hyper-cleavable Monomeric Fragment of Phage Lambda Repressor Containing… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7B004
- Elsewhere: RCSB PDB 2HO0 · PDBe 2HO0 · UniProt Q7B004
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