MolNFT v1 · #38631 · RNA
The NMR structure of an internal loop from 23S ribosomal RNA of deinococcus radiodurans differs from the structure in the crystal of the ribosomal subunit
2H49 · 5'-R(*GP*GP*CP*UP*AP*AP*GP*AP*C)-3': “The NMR structure of an internal loop from 23S ribosomal RNA of deinococcus radiodurans differs from the…”. Solution nmr. MolNFT v1 #38631 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 2H49
- Type
- RNA
- Length
- 18 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-R(*GP*GP*CP*UP*AP*AP*GP*AP*C)-3'; 5'-R(*GP*UP*CP*GP*AP*AP*GP*CP*C)-3'
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5'-R(*GP*GP*CP*UP*AP*AP*GP*AP*C)-3' | rna | 9 | — | — |
| B | 5'-R(*GP*UP*CP*GP*AP*AP*GP*CP*C)-3' | rna | 9 | — | — |
Interfaces
1 interface between chains.
- A–B · 489 Ų buried · 44 hydrogen bonds · nucleic-nucleic
Compared structures
- 2H49 · The NMR Structure of an Internal Loop from 23S Ribosomal RNA of Deinococcus radiodurans… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2H49 · PDBe 2H49
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