Research workbench
The NMR structure of an internal loop from 23S ribosomal RNA of deinococcus radiodurans differs from the structure in the crystal of the ribosomal subunit
Analyse The NMR structure of an internal loop from 23S ribosomal RNA of deinococcus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2H49
- Type
- RNA
- Length
- 18 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-R(*GP*GP*CP*UP*AP*AP*GP*AP*C)-3'; 5'-R(*GP*UP*CP*GP*AP*AP*GP*CP*C)-3'
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5'-R(*GP*GP*CP*UP*AP*AP*GP*AP*C)-3' | rna | 9 | — | — |
| B | 5'-R(*GP*UP*CP*GP*AP*AP*GP*CP*C)-3' | rna | 9 | — | — |
Interfaces
1 interface between chains.
- A–B · 489 Ų buried · 44 hydrogen bonds · nucleic-nucleic
Compared structures
- 2H49 · The NMR Structure of an Internal Loop from 23S Ribosomal RNA of Deinococcus radiodurans… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2H49 · PDBe 2H49
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