MolNFT v1 · #38621 · protein
Structure of the HIV-1 matrix protein bound to di-C4- phosphatidylinositol-(4,5)-bisphosphate
2H3Z · Gag polyprotein: “Structure of the HIV-1 matrix protein bound to di-C4- phosphatidylinositol-(4,5)-bisphosphate”. Solution nmr, 1 ligand (PBU). MolNFT v1 #38621 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2H3Z
- Type
- protein
- Length
- 131 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Gag polyprotein
- UniProt
- P12497
- Ligands
- PBU
Structure
solution nmr · 1 distinct chain · 60% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Gag polyprotein | protein | 131 | 60% helix, 2% strand | P12497 |
Ligands and binding sites
- PBU · (2R)-3-{[(R)-hydroxy{[(1r,2r,3s,4r,5r,6s)-2,3,6-trihydroxy-4,5-bis(phosphonooxy) cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dibutanoate · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 2H3Z · Structure of the HIV-1 matrix protein bound to… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P12497
- Elsewhere: RCSB PDB 2H3Z · PDBe 2H3Z · UniProt P12497
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