MolNFT v1 · #38350 · protein
Three dimensional structure of the protein P54332 from bacillus subtilis. northeast structural genomics consortium target SR353.
2GUJ · Phage-like element pbsx protein xkdm: “Three dimensional structure of the protein P54332 from bacillus subtilis. northeast structural genomics…”. X-ray diffraction, 1 pocket (best druggability 0.53). MolNFT v1 #38350 on GenesisL1…
- PDB
- 2GUJ
- Type
- protein
- Length
- 270 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Phage-like element pbsx protein xkdm
- UniProt
- P54332
- Pockets
- 1 · best druggability 0.53
Structure
x-ray diffraction · 2 distinct chains · 16% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phage-like element pbsx protein xkdm | protein | 133 | 16% helix, 37% strand | P54332 |
| B | Phage-like element pbsx protein xkdm | protein | 137 | 15% helix, 37% strand | P54332 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 349 | 0.53 | 0.74 | 35 | empty |
Interfaces
1 interface between chains.
- A–B · 123 Ų buried · 0 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 10 modified (engineered).
Compared structures
- 2GUJ · Three dimensional structure of the protein P54332 from Bacillus Subtilis. Northeast… · the same entry in another collection · chain A against A, TM-score 1.00
- P54332 · AlphaFold monomer V2.0 prediction for phage-like element pbsx protein xkdm (P54332) · a predicted model of the same protein · chain A against A, TM-score 0.58
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54332
- Elsewhere: RCSB PDB 2GUJ · PDBe 2GUJ · UniProt P54332
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.