MolNFT v1 · #38212 · protein
Crystal structure of flavoprotein HI0933 from haemophilus influenzae rd
2GQF · Hypothetical protein HI0933: “Crystal structure of flavoprotein HI0933 from haemophilus influenzae rd”. X-ray diffraction, 2 ligands (FAD, SO4), 4 pockets (best druggability 0.79). MolNFT v1 #38212 on GenesisL1: 3D structure…
- PDB
- 2GQF
- Type
- protein
- Length
- 401 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein HI0933
- UniProt
- P44941
- Ligands
- FAD, SO4
- Pockets
- 4 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 36% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein HI0933 | protein | 401 | 36% helix, 25% strand | P44941 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 488 | 0.79 | 0.86 | 75 | FAD |
| 2 | 73 | 0.42 | 0.80 | 15 | empty |
| 3 | 53 | 0.40 | 0.81 | 12 | empty |
| 4 | 51 | 0.28 | 0.75 | 13 | empty |
Modifications
Observed in the structure: 7 modified (engineered).
Compared structures
- 2GQF · Crystal structure of flavoprotein HI0933 from Haemophilus influenzae Rd · the same entry in another collection · chain A against A, TM-score 1.00
- P44941 · AlphaFold monomer V2.0 prediction for uncharacterized protein HI_0933 (P44941) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P44941
- Elsewhere: RCSB PDB 2GQF · PDBe 2GQF · UniProt P44941
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