MolNFT v1 · #36793 · protein

High resolution xray structure of OMP32

2FGR · Outer membrane porin protein 32: “High resolution xray structure of OMP32”. X-ray diffraction, 2 ligands (CA, SO4), 1 pocket (best druggability 0.65). MolNFT v1 #36793 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2FGR
Type: protein
Length: 340 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Outer membrane porin protein 32; Pap
UniProt: P24305
Ligands: CA, SO4
Pockets: 1 · best druggability 0.65

Structure

x-ray diffraction · 2 distinct chains · 4% helix, 57% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Outer membrane porin protein 32	protein	332	4% helix, 58% strand	P24305
B	Pap	protein	8	0% helix, 13% strand	—

Ligands and binding sites

CA · Calcium ion · metal · 3 copies · chains A
SO4 · Sulfate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	561	0.65	0.76	68	SO4

Interfaces

1 interface between chains.

A–B · 388 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

2FGR · High resolution Xray structure of Omp32 · the same entry in another collection · chain A against A, TM-score 1.00
P24305 · AlphaFold monomer V2.0 prediction for outer membrane porin protein 32 (P24305) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P24305
Elsewhere: RCSB PDB 2FGR · PDBe 2FGR · UniProt P24305

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