MolNFT v1 · #36042 · protein

Crystal structure of a lema protein (TM0961) from thermotoga maritima MSB8 at 2.28 a resolution

2ETD: “Crystal structure of a lema protein (TM0961) from thermotoga maritima MSB8 at 2.28 a resolution”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.28). MolNFT v1 #36042 on GenesisL1: 3D structure, binding sites and…

PDB: 2ETD
Type: protein
Length: 141 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lema protein
UniProt: Q9X056
Ligands: CL
Pockets: 1 · best druggability 0.28

Structure

x-ray diffraction · 1 distinct chain · 82% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lema protein	protein	141	82% helix, 0% strand	Q9X056

Ligands and binding sites

CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	57	0.28	0.74	15	CL

Modifications

Observed in the structure: 13 modified (methylation, engineered).

Compared structures

2ETD · Crystal structure of a lema protein (tm0961) from thermotoga maritima msb8 at 2.28 A… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9X056
Elsewhere: RCSB PDB 2ETD · PDBe 2ETD · UniProt Q9X056

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