MolNFT v1 · #34429 · protein
Crystal structure of the carboxy terminal domain of colicin E5 complexed with its inhibitor
2DFX · Colicin-E5: “Crystal structure of the carboxy terminal domain of colicin E5 complexed with its inhibitor”. X-ray diffraction. MolNFT v1 #34429 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2DFX
- Type
- protein
- Length
- 198 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Colicin-E5; Colicin-E5 immunity protein
- EC
- 3.1.-.-
- UniProt
- P18000, P13476
Structure
x-ray diffraction · 2 distinct chains · 33% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| E | Colicin-E5 (EC 3.1.-.-) | protein | 92 | 24% helix, 37% strand | P18000 |
| I | Colicin-E5 immunity protein | protein | 106 | 41% helix, 21% strand | P13476 |
Interfaces
1 interface between chains.
- E–I · 1339 Ų buried · 28 hydrogen bonds · protein-protein
Compared structures
- 2DFX · Crystal structure of the carboxy terminal domain of colicin E5 complexed with its… · the same entry in another collection · chain E against E, TM-score 1.00
- P18000 · AlphaFold monomer V2.0 prediction for colicin-E5 (P18000) · a predicted model of the same protein · chain E against A, TM-score 0.97
- P13476 · AlphaFold monomer V2.0 prediction for colicin-E5 immunity protein (P13476) · a predicted model of the same protein · chain I against A, TM-score 0.76
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P18000
- Every structure of UniProt P13476
- Elsewhere: RCSB PDB 2DFX · PDBe 2DFX · UniProt P18000 · UniProt P13476
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.