MolNFT v1 · #34194 · protein
Solution structure of the B-box domain of the human tripartite motif- containing 63 protein
2D8U · Ubiquitin ligase TRIM63: “Solution structure of the B-box domain of the human tripartite motif- containing 63 protein”. Solution nmr, 1 ligand (ZN). MolNFT v1 #34194 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2D8U
- Type
- protein
- Length
- 64 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ubiquitin ligase TRIM63
- EC
- 6.3.2.-
- UniProt
- Q969Q1
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 6% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin ligase TRIM63 (EC 6.3.2.-) | protein | 64 | 6% helix, 6% strand | Q969Q1 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 2D8U · Solution structure of the B-box domain of the human tripartite motif-containing 63 protein · the same entry in another collection · chain A against A, TM-score 1.00
- Q969Q1 · AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase TRIM63 (Q969Q1) · a predicted model of the same protein · chain A against A, TM-score 0.54
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q969Q1
- Elsewhere: RCSB PDB 2D8U · PDBe 2D8U · UniProt Q969Q1
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