MolNFT v1 · #34188 · protein
Structure of vil-thaumatin
2D8O · Thaumatin I: “Structure of vil-thaumatin”. X-ray diffraction, 1 ligand (IOD). MolNFT v1 #34188 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2D8O
- Type
- protein
- Length
- 207 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Thaumatin I
- UniProt
- P02883
- Ligands
- IOD
Structure
x-ray diffraction · 1 distinct chain · 11% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Thaumatin I | protein | 207 | 11% helix, 38% strand | P02883 |
Ligands and binding sites
- IOD · Iodide ion · ion · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 8 disulfide, 3 modified (disulfide, nonstandard).
Compared structures
- 2D8O · Structure of VIL-thaumatin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02883
- Elsewhere: RCSB PDB 2D8O · PDBe 2D8O · UniProt P02883
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