MolNFT v1 · #32668 · protein

Human serum albumin complexed with phenylbutazone

2BXC: “Human serum albumin complexed with phenylbutazone”. X-ray diffraction, 1 ligand (P1Z), 17 pockets (best druggability 0.84). MolNFT v1 #32668 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2BXC
Type: protein
Length: 1,156 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Serum albumin
UniProt: P02768
Ligands: P1Z
Pockets: 17 · best druggability 0.84

Structure

x-ray diffraction · 1 distinct chain · 74% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Serum albumin	protein	578	74% helix, 0% strand	P02768

Ligands and binding sites

P1Z · 4-butyl-1,2-diphenyl-pyrazolidine-3,5-dione · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

17 pockets found on a 1 Å grid, 11 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1181	0.84	0.85	120	P1Z
2	864	0.84	0.85	98	P1Z
3	468	0.72	0.81	44	empty
4	536	0.71	0.80	52	empty
5	132	0.71	0.91	36	empty

Modifications

Observed in the structure: 34 disulfide (disulfide).

Compared structures

2BXC · Human serum albumin complexed with phenylbutazone · the same entry in another collection · chain A against A, TM-score 1.00
P02768 · AlphaFold monomer V2.0 prediction for albumin (P02768) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02768
Elsewhere: RCSB PDB 2BXC · PDBe 2BXC · UniProt P02768

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.