MolNFT v1 · #32619 · protein
Sugar ring distortion in the glycosyl-enzyme intermediate of a family G/11 xylanase.
2BVV · Protein (endo-1,4-beta-xylanase): “Sugar ring distortion in the glycosyl-enzyme intermediate of a family G/11 xylanase.”. X-ray diffraction, 1 pocket (best druggability 0.51). MolNFT v1 #32619 on GenesisL1: 3D structure, binding…
- PDB
- 2BVV
- Type
- protein
- Length
- 185 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (endo-1,4-beta-xylanase)
- EC
- 3.2.1.8
- UniProt
- P09850
- Pockets
- 1 · best druggability 0.51
Structure
x-ray diffraction · 1 distinct chain · 5% helix, 62% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein (endo-1,4-beta-xylanase) (EC 3.2.1.8) | protein | 185 | 5% helix, 62% strand | P09850 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 152 | 0.51 | 0.79 | 25 | empty |
Compared structures
- 2BVV · Sugar ring distortion in the glycosyl-enzyme intermediate of a family G/11 xylanase. · the same entry in another collection · chain A against A, TM-score 1.00
- P09850 · AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase (P09850) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P09850
- Elsewhere: RCSB PDB 2BVV · PDBe 2BVV · UniProt P09850
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