MolNFT v1 · #32552 · protein
Crystal structure of ALR0975
2BTW · ALR0975 protein: “Crystal structure of ALR0975”. X-ray diffraction, 1 ligand (CA), 4 pockets (best druggability 0.68). MolNFT v1 #32552 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2BTW
- Type
- protein
- Length
- 420 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ALR0975 protein
- EC
- 2.3.2.15
- UniProt
- Q8YY76
- Ligands
- CA
- Pockets
- 4 · best druggability 0.68
Structure
x-ray diffraction · 2 distinct chains · 40% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ALR0975 protein (EC 2.3.2.15) | protein | 210 | 39% helix, 20% strand | Q8YY76 |
| B | ALR0975 protein (EC 2.3.2.15) | protein | 210 | 40% helix, 20% strand | Q8YY76 |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 463 | 0.68 | 0.79 | 61 | empty |
| 2 | 141 | 0.41 | 0.75 | 33 | empty |
| 3 | 67 | 0.37 | 0.79 | 17 | empty |
| 4 | 69 | 0.34 | 0.77 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 1206 Ų buried · 16 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 10 modified (engineered).
Compared structures
- 2BTW · Crystal structure of Alr0975 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8YY76
- Elsewhere: RCSB PDB 2BTW · PDBe 2BTW · UniProt Q8YY76
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