MolNFT v1 · #32280 · protein

Apo-structure of the C-terminal decarboxylase domain of arna

2BLL · Protein yfbg: “Apo-structure of the C-terminal decarboxylase domain of arna”. X-ray diffraction, 3 pockets (best druggability 0.73). MolNFT v1 #32280 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2BLL
Type: protein
Length: 330 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein yfbg
EC: 4.1.1.35
UniProt: P77398
Pockets: 3 · best druggability 0.73

Structure

x-ray diffraction · 1 distinct chain · 45% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein yfbg (EC 4.1.1.35)	protein	330	45% helix, 18% strand	P77398

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	537	0.73	0.81	42	empty
2	119	0.41	0.76	22	empty
3	73	0.38	0.78	11	empty

Compared structures

2BLL · Apo-structure of the C-terminal decarboxylase domain of ArnA · the same entry in another collection · chain A against A, TM-score 1.00
P77398 · AlphaFold monomer V2.0 prediction for bifunctional polymyxin resistance protein arna… · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P77398
Elsewhere: RCSB PDB 2BLL · PDBe 2BLL · UniProt P77398

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