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MolNFT v1 · #31148 · protein

Structure of human ADP-ribosylation factor-like 10C

2AL7: “Structure of human ADP-ribosylation factor-like 10C”. X-ray diffraction, 2 ligands (GDP, MG), 1 pocket (best druggability 0.27). MolNFT v1 #31148 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
2AL7
Type
protein
Length
155 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
ADP-ribosylation factor-like 10C
UniProt
Q9NVJ2
Ligands
GDP, MG
Pockets
1 · best druggability 0.27

Structure

x-ray diffraction · 1 distinct chain · 36% helix, 28% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AADP-ribosylation factor-like 10Cprotein15536% helix, 28% strandQ9NVJ2

Ligands and binding sites

  • GDP · Guanosine-5'-diphosphate · ligand · chains A
  • MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1510.270.7516MG

Compared structures

  • 2AL7 · Structure Of Human ADP-Ribosylation Factor-Like 10C · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9NVJ2 · AlphaFold monomer V2.0 prediction for ADP-ribosylation factor-like protein 8B (Q9NVJ2) · a predicted model of the same protein · chain A against A, TM-score 0.99

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