GL1X · GenesisL1 explorer

MolNFT v1 · #29845 · protein

Crystal structure of catalytically-active phospholipase A2 with bound calcium

1ZL7 · Hypotensive phospholipase A2: “Crystal structure of catalytically-active phospholipase A2 with bound calcium”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #29845 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
1ZL7
Type
protein
Length
122 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Hypotensive phospholipase A2
EC
3.1.1.4
UniProt
Q8AXY1
Ligands
CA

Structure

x-ray diffraction · 1 distinct chain · 48% helix, 8% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AHypotensive phospholipase A2 (EC 3.1.1.4)protein12248% helix, 8% strandQ8AXY1

Ligands and binding sites

  • CA · Calcium ion · metal · chains A
  • GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 7 disulfide (disulfide).

Compared structures

  • 1ZL7 · Crystal structure of catalytically-active phospholipase A2 with bound calcium · the same entry in another collection · chain A against A, TM-score 1.00
  • Q8AXY1 · AlphaFold monomer V2.0 prediction for acidic phospholipase A2 btha-1 (Q8AXY1) · a predicted model of the same protein · chain A against A, TM-score 0.98

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