MolNFT v1 · #2980 · protein

Structure of T-cell surface glycoprotein CD4

1CDJ: “Structure of T-cell surface glycoprotein CD4”. X-ray diffraction, 1 pocket (best druggability 0.35). MolNFT v1 #2980 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1CDJ
Type: protein
Length: 178 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: T-cell surface glycoprotein CD4
UniProt: P01730
Pockets: 1 · best druggability 0.35

Structure

x-ray diffraction · 1 distinct chain · 3% helix, 39% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	T-cell surface glycoprotein CD4	protein	178	3% helix, 39% strand	P01730

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	66	0.35	0.77	13	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

1CDJ · Structure of T-cell surface glycoprotein CD4 · the same entry in another collection · chain A against A, TM-score 1.00
P01730 · AlphaFold monomer V2.0 prediction for T-cell surface glycoprotein CD4 (P01730) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P01730
Elsewhere: RCSB PDB 1CDJ · PDBe 1CDJ · UniProt P01730

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