MolNFT v1 · #29555 · protein

Coordinates of tmrna, smpb, ef-tu and H44 fitted into cryo-EM MAP of the 70S ribosome and tmrna complex

1ZC8 · Ssra-binding protein: “Coordinates of tmrna, smpb, ef-tu and H44 fitted into cryo-EM MAP of the 70S ribosome and tmrna complex”. Electron microscopy, 3 pockets (best druggability 0.48). MolNFT v1 #29555 on GenesisL1: 3D structure…

PDB: 1ZC8
Type: protein
Length: 535 residues
Chains: 2
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ssra-binding protein; Elongation factor tu
Pockets: 3 · best druggability 0.48

Structure

electron microscopy · 2 distinct chains · 0% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
K	Ssra-binding protein	protein	130	0% helix, 0% strand	—
Y	Elongation factor tu	protein	405	0% helix, 0% strand	—

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	215	0.48	0.72	46	empty
2	170	0.45	0.73	45	empty
3	151	0.42	0.72	43	empty

Compared structures

1ZC8 · Coordinates of tmRNA, SmpB, EF-Tu and h44 fitted into Cryo-EM map of the 70S ribosome and… · the same entry in another collection · chain K against K, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1ZC8 · PDBe 1ZC8

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