MolNFT v1 · #29198 · protein
Structural determinants of tissue tropism and in vivo pathogenicity for the parvovirus minute virus of mice
1Z14 · VP2: “Structural determinants of tissue tropism and in vivo pathogenicity for the parvovirus minute virus of mice”. X-ray diffraction, 12 pockets (best druggability 0.66). MolNFT v1 #29198 on GenesisL1: 3D structure, binding sites…
- PDB
- 1Z14
- Type
- protein
- Length
- 549 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- VP2
- UniProt
- Q84367
- Pockets
- 12 · best druggability 0.66
Structure
x-ray diffraction · 1 distinct chain · 9% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | VP2 | protein | 549 | 9% helix, 30% strand | Q84367 |
Pockets
12 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.66 | 0.96 | 15 | empty |
| 2 | 417 | 0.58 | 0.75 | 43 | empty |
| 3 | 228 | 0.56 | 0.78 | 30 | empty |
| 4 | 94 | 0.48 | 0.81 | 21 | empty |
| 5 | 155 | 0.45 | 0.75 | 29 | empty |
Compared structures
- 1Z14 · Structural Determinants of Tissue Tropism and In Vivo Pathogenicity for the Parvovirus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q84367
- Elsewhere: RCSB PDB 1Z14 · PDBe 1Z14 · UniProt Q84367
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